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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02654Hypothetical protein; KEGG: shn:Shewana3_3063 4.6e-07 phosphatidylglycerophosphatase K01094; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00. (708 aa)    
Predicted Functional Partners:
CKO_02656
Hypothetical protein; KEGG: eci:UTI89_C4034 2.1e-218 chuW; putative oxygen independent coproporphyrinogen III oxidase K02495; COG: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Psort location: Cytoplasmic, score:9.97.
 
     0.842
CKO_02655
Hypothetical protein; COG: COG4558 ABC-type hemin transport system, periplasmic component; Psort location: Periplasmic, score:9.76.
 
  
 0.833
CKO_02657
Hypothetical protein; KEGG: hdu:HD0037 6.4e-22 chuW; probable oxygen-independent coproporphyrinogen III oxidase K02495; COG: COG3721 Putative heme iron utilization protein.
 
  
 0.813
CKO_01329
Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.775
CKO_02658
Hypothetical protein; KEGG: rha:RHA1_ro02137 0.00014 probable nucleoside-diphosphate-sugar epimerase K01820; COG: COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
 
     0.726
CKO_02659
Hypothetical protein; COG: COG0609 ABC-type Fe3+-siderophore transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.684
CKO_02566
Hypothetical protein; KEGG: spt:SPA2137 1.4e-143 entB; isochorismatase K01252; COG: COG3433 Aryl carrier domain; Psort location: Cytoplasmic, score:8.96.
  
  
 0.676
hmuV
Hypothetical protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
  
 0.671
CKO_00040
COG: COG0810 Periplasmic protein TonB, links inner and outer membranes; Psort location: CytoplasmicMembrane, score:8.02.
  
 
 0.657
CKO_01694
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
    
 
 0.608
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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