close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02664Hypothetical protein; KEGG: oih:OB0089 2.7e-28 cation-transporting ATPase K07507; COG: COG1285 Uncharacterized membrane protein; Psort location: CytoplasmicMembrane, score:9.46. (237 aa)    
Predicted Functional Partners:
CKO_02665
Hypothetical protein; KEGG: sty:STY0544 0. ybaR; copper-transporting ATPase K01533; COG: COG2217 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:10.00.
 
   
 0.768
CKO_03839
Hypothetical protein; KEGG: yps:YPTB0594 0. putative Ca++ transporting P-type ATPase K01529; COG: COG0474 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.754
CKO_03567
Hypothetical protein; KEGG: stt:t4491 0. mgtA; Mg(2+) transport ATPase, P-type K01531; COG: COG0474 Cation transport ATPase; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 0.731
CKO_02663
Hypothetical protein; KEGG: tfu:Tfu_2581 1.5e-32 inosine-uridine preferring nucleoside hydrolase K01239; COG: COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family.
       0.626
CKO_02662
Hypothetical protein; KEGG: msm:MSMEG_3095 0.0013 D-ribose-binding periplasmic protein; COG: COG1609 Transcriptional regulators; Psort location: Cytoplasmic, score:9.97.
       0.581
CKO_00993
Hypothetical protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.535
CKO_02904
Hypothetical protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.535
ftsH
Hypothetical protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.439
CKO_04614
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
  
 
 0.417
atpB
Hypothetical protein; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
    
 
 0.410
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.