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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02686Hypothetical protein; KEGG: cal:orf19.4683 1.0e-06 MLP1; myosin-like protein involved in translocation of macromolecules between the nucleoplasm and the NPC K01553; COG: COG3264 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score:10.00. (1120 aa)    
Predicted Functional Partners:
CKO_02033
Hypothetical protein; COG: NOG09737 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.575
CKO_04263
COG: COG3097 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0267 family.
  
     0.544
CKO_02687
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
       0.524
CKO_01288
Hypothetical protein; COG: COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction.
 
     0.511
CKO_01055
Hypothetical protein; Required for resistance to DNA-damaging agents. Belongs to the universal stress protein A family.
  
     0.510
CKO_02207
Hypothetical protein; KEGG: stm:STM0936 4.4e-154 hcr; NADH oxidoreductase for hcp gene product; COG: COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Psort location: Cytoplasmic, score:8.96.
  
     0.494
CKO_02331
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
  
     0.480
CKO_03173
COG: COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance.
  
     0.456
CKO_00503
Hypothetical protein; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.448
menC
Hypothetical protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.447
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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