close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02692Hypothetical protein; KEGG: sty:STY0515 1.0e-83 maA; maltose O-acetyltransferase K00661; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score:9.97. (183 aa)    
Predicted Functional Partners:
CKO_00755
Hypothetical protein; KEGG: stm:STM2082 2.0e-213 rfbP; LPS side chain defect: bifunctional enzyme: undecaprenol-phosphate galactosephosphotransferase, and O-antigen transfer K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.883
CKO_03886
Hypothetical protein; KEGG: pha:PSHAa2996 1.8e-13 carbohydrate O-acetyltransferase K00661; COG: COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.728
CKO_00725
Hypothetical protein; KEGG: ssn:SSO_2113 0. putative tyrosine-protein kinase; K00903 protein-tyrosine kinase K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score:9.82.
  
  
 0.565
CKO_02694
Hypothetical protein; COG: NOG07873 non supervised orthologous group.
       0.543
CKO_00738
Hypothetical protein; KEGG: eci:UTI89_C2320 4.1e-229 wcaJ; putative colanic acid biosynthsis UDP-glucose lipid carrier transferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.535
wecE
Hypothetical protein; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.521
CKO_01022
Hypothetical protein; KEGG: psp:PSPPH_3420 6.3e-130 aminotransferase, DegT/DnrJ/EryC1/StrS family K01726; COG: COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.521
CKO_00736
Hypothetical protein; KEGG: ecp:ECP_2089 1.3e-248 mannose-1-phosphate guanylyltransferase K00971; COG: COG0662 Mannose-6-phosphate isomerase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.513
CKO_02691
Hypothetical protein; COG: NOG13543 non supervised orthologous group.
  
    0.513
CKO_01017
Hypothetical protein; COG: NOG17471 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
  
 0.488
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.