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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02760Hypothetical protein; KEGG: aeh:Mlg_0022 4.7e-05 cytochrome c biogenesis protein, transmembrane region K04084; COG: COG5373 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00. (876 aa)    
Predicted Functional Partners:
CKO_02759
Hypothetical protein; COG: NOG14010 non supervised orthologous group.
 
  
 0.968
CKO_02762
Hypothetical protein.
       0.773
CKO_02805
Hypothetical protein; KEGG: eci:UTI89_C0334 7.5e-56 hypothetical protein; COG: COG3468 Type V secretory pathway, adhesin AidA.
  
     0.701
CKO_01421
Hypothetical protein; COG: NOG22391 non supervised orthologous group.
  
     0.579
CKO_02761
Hypothetical protein.
       0.572
CKO_02763
Hypothetical protein; COG: COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.572
CKO_04373
COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:9.71.
  
     0.554
CKO_03446
Hypothetical protein; COG: NOG06307 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.537
CKO_03744
Hypothetical protein; COG: COG2215 ABC-type uncharacterized transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.529
CKO_03684
Hypothetical protein; COG: COG2771 DNA-binding HTH domain-containing proteins.
  
     0.520
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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