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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02769Hypothetical protein; Component of the transport system for branched-chain amino acids. (439 aa)    
Predicted Functional Partners:
CKO_02770
Hypothetical protein.
       0.773
CKO_02767
Hypothetical protein; KEGG: eci:UTI89_C0120 5.4e-101 aroP; aromatic amino acid transport protein AroP K03293; COG: COG1113 Gamma-aminobutyrate permease and related permeases; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.724
sstT
Hypothetical protein; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.568
CKO_01755
Hypothetical protein; KEGG: eci:UTI89_C4668 2.4e-36 gltP; glutamate-aspartate symport protein K03309; COG: COG1823 Predicted Na+/dicarboxylate symporter; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
   
 0.480
CKO_02771
Hypothetical protein; KEGG: stm:STM0398 1.2e-220 phoR; sensory kinase in two-component regulatory system with PhoB, regulates pho regulon K07636; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
       0.440
CKO_03379
Hypothetical protein; KEGG: hpa:HPAG1_0925 1.4e-63 D-alanine glycine permease K01613; COG: COG1115 Na+/alanine symporter; Psort location: CytoplasmicMembrane, score:10.00.
  
   
 0.431
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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