Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CKO_02802Hypothetical protein. (49 aa)    
Predicted Functional Partners:
CKO_02801
Hypothetical protein; KEGG: bur:Bcep18194_A3507 1.0e-28 ABC transporter, fused ATPase and inner membrane subunits K02471; COG: COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components; Psort location: CytoplasmicMembrane, score:10.00.
       0.773
CKO_02800
Hypothetical protein; KEGG: abo:ABO_0207 0.0095 pyrE; orotate phosphoribosyltransferase K00762; COG: NOG06003 non supervised orthologous group.
       0.727
CKO_02803
Hypothetical protein; KEGG: eci:UTI89_C0391 3.3e-188 yaiH; penicillin-binding protein AmpH K01467; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins; Psort location: Periplasmic, score:9.44.
       0.426
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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