close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02803Hypothetical protein; KEGG: eci:UTI89_C0391 3.3e-188 yaiH; penicillin-binding protein AmpH K01467; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins; Psort location: Periplasmic, score:9.44. (376 aa)    
Predicted Functional Partners:
CKO_00245
Hypothetical protein; KEGG: spz:M5005_Spy_1664 0.0062 PTS system, mannitol (cryptic)-specific IIA component K00890; COG: COG3711 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.96.
  
     0.659
CKO_01260
Hypothetical protein; COG: NOG12149 non supervised orthologous group.
  
     0.638
CKO_02005
Hypothetical protein; COG: NOG14214 non supervised orthologous group.
  
     0.594
CKO_01577
Hypothetical protein; COG: NOG11441 non supervised orthologous group; Belongs to the UPF0482 family.
  
     0.565
CKO_01751
Hypothetical protein; COG: NOG07880 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.561
panZ
Hypothetical protein; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
  
     0.513
CKO_02801
Hypothetical protein; KEGG: bur:Bcep18194_A3507 1.0e-28 ABC transporter, fused ATPase and inner membrane subunits K02471; COG: COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components; Psort location: CytoplasmicMembrane, score:10.00.
       0.486
CKO_01950
Hypothetical protein; KEGG: sec:SC1158 5.2e-80 ycfN; putative cytoplasmic protein K07251; COG: COG0510 Predicted choline kinase involved in LPS biosynthesis; Psort location: Cytoplasmic, score:8.96.
  
     0.480
CKO_02575
Hypothetical protein; KEGG: stm:STM0588 0. entF; enterobactin synthetase, component F (nonribosomal peptide synthetase) K02364; COG: COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases; Psort location: CytoplasmicMembrane, score:8.46.
  
  
 0.476
CKO_01619
Hypothetical protein; KEGG: spt:SPA1384 1.1e-203 rstB; two component sensor kinase K07639; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.470
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.