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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02853Hypothetical protein; KEGG: sfl:SF1683 1.0e-33 ydhO; putative lipoprotein K01183; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins); Psort location: Cytoplasmic, score:9.26. (239 aa)    
Predicted Functional Partners:
CKO_02852
Hypothetical protein; COG: NOG08675 non supervised orthologous group.
  
    0.643
CKO_02851
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.636
CKO_02858
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
   0.613
CKO_02854
COG: COG1360 Flagellar motor protein; Psort location: CytoplasmicMembrane, score:8.02.
  
    0.534
CKO_02855
Hypothetical protein; COG: COG1291 Flagellar motor component; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.531
CKO_02856
Hypothetical protein; KEGG: reh:H16_B0256 3.5e-26 fliA; DNA-directed RNA polymerase sigma subunit / flagellum specific K00960; COG: COG1191 DNA-directed RNA polymerase specialized sigma subunit; Psort location: Cytoplasmic, score:8.96; Belongs to the sigma-70 factor family.
       0.516
CKO_02859
Hypothetical protein; KEGG: mmu:75560 0.00035 Ep400; E1A binding protein p400 K01529; COG: COG3144 Flagellar hook-length control protein.
  
    0.504
CKO_02862
Hypothetical protein; COG: COG1516 Flagellin-specific chaperone FliS.
  
    0.498
CKO_02861
Hypothetical protein.
       0.473
CKO_02863
Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.458
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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