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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02858Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (156 aa)    
Predicted Functional Partners:
CKO_02859
Hypothetical protein; KEGG: mmu:75560 0.00035 Ep400; E1A binding protein p400 K01529; COG: COG3144 Flagellar hook-length control protein.
  
  
 0.966
CKO_02856
Hypothetical protein; KEGG: reh:H16_B0256 3.5e-26 fliA; DNA-directed RNA polymerase sigma subunit / flagellum specific K00960; COG: COG1191 DNA-directed RNA polymerase specialized sigma subunit; Psort location: Cytoplasmic, score:8.96; Belongs to the sigma-70 factor family.
  
  
 0.961
CKO_02855
Hypothetical protein; COG: COG1291 Flagellar motor component; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.958
CKO_02862
Hypothetical protein; COG: COG1516 Flagellin-specific chaperone FliS.
  
  
 0.947
CKO_01978
Hypothetical protein; KEGG: stm:STM1182 1.6e-149 flgJ; flagellar biosynthesis K02395; COG: COG3951 Rod binding protein.
  
  
 0.945
CKO_02863
Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.940
CKO_00996
Hypothetical protein; COG: COG3190 Flagellar biogenesis protein.
  
 
 0.906
CKO_00998
Hypothetical protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.904
CKO_02854
COG: COG1360 Flagellar motor protein; Psort location: CytoplasmicMembrane, score:8.02.
  
 
 0.901
CKO_04368
Hypothetical protein; KEGG: sbo:SBO_2396 2.5e-190 evgS, evgA; putative sensor for regulator EvgA K07679; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score:9.82.
  
 
 0.895
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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