STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02862Hypothetical protein; COG: COG1516 Flagellin-specific chaperone FliS. (130 aa)    
Predicted Functional Partners:
CKO_02872
Hypothetical protein; COG: COG1344 Flagellin and related hook-associated proteins; Psort location: OuterMembrane, score:9.49.
 
 
 0.986
CKO_02863
Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.985
CKO_02859
Hypothetical protein; KEGG: mmu:75560 0.00035 Ep400; E1A binding protein p400 K01529; COG: COG3144 Flagellar hook-length control protein.
 
  
 0.976
CKO_02865
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.974
CKO_01976
Hypothetical protein; COG: COG1344 Flagellin and related hook-associated proteins.
 
 
 0.973
CKO_02855
Hypothetical protein; COG: COG1291 Flagellar motor component; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.971
CKO_02854
COG: COG1360 Flagellar motor protein; Psort location: CytoplasmicMembrane, score:8.02.
 
  
 0.969
CKO_02867
Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.968
CKO_02882
Hypothetical protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.966
fliE-2
Hypothetical protein; KEGG: sye:Syncc9902_2308 0.00027 argininosuccinate synthase K01940; COG: COG1677 Flagellar hook-basal body protein.
 
 
 0.961
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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