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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02869Hypothetical protein; KEGG: eci:UTI89_C2354 0.0014 baeR; transcriptional response regulatory protein BaeR K07664; COG: COG3710 DNA-binding winged-HTH domains. (317 aa)    
Predicted Functional Partners:
CKO_02870
Hypothetical protein; COG: NOG37669 non supervised orthologous group.
  
    0.803
CKO_01869
Hypothetical protein; COG: NOG31953 non supervised orthologous group.
  
     0.593
CKO_02868
Hypothetical protein.
       0.565
CKO_00426
Hypothetical protein; KEGG: bme:BMEII0148 2.6e-74 extracellular serine protease; COG: COG3468 Type V secretory pathway, adhesin AidA.
  
   
 0.541
CKO_03469
Hypothetical protein; KEGG: nme:NMB1289 1.9e-50 type II restriction enzyme, putative K01155; COG: NOG14036 non supervised orthologous group.
  
     0.534
CKO_03114
COG: COG3121 P pilus assembly protein, chaperone PapD.
  
     0.514
CKO_04226
Hypothetical protein.
  
  
 0.496
CKO_03404
COG: COG3121 P pilus assembly protein, chaperone PapD.
  
     0.481
CKO_02838
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
  
     0.457
CKO_00277
Hypothetical protein; KEGG: aha:AHA_1764 2.7e-12 ubiquitin ligase sinat5 K01932; COG: NOG17950 non supervised orthologous group.
  
     0.455
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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