close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02889Hypothetical protein; KEGG: sat:SYN_01107 9.3e-26 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score:8.96. (357 aa)    
Predicted Functional Partners:
CKO_02888
Hypothetical protein; KEGG: gox:GOX1390 0.0016 methyltransferase K03183; COG: COG0457 FOG: TPR repeat; Psort location: Cytoplasmic, score:8.96.
 
    0.756
CKO_00755
Hypothetical protein; KEGG: stm:STM2082 2.0e-213 rfbP; LPS side chain defect: bifunctional enzyme: undecaprenol-phosphate galactosephosphotransferase, and O-antigen transfer K00996; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.700
CKO_00725
Hypothetical protein; KEGG: ssn:SSO_2113 0. putative tyrosine-protein kinase; K00903 protein-tyrosine kinase K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score:9.82.
 
  
 0.530
CKO_02886
Hypothetical protein; COG: NOG23221 non supervised orthologous group.
       0.527
CKO_02376
Hypothetical protein; KEGG: ecs:ECs0787 3.7e-180 UDP-glucose 4-epimerase K01784; COG: COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.501
CKO_00129
Hypothetical protein; KEGG: stm:STM3922 1.5e-176 rffG; dTDP-glucose 4,6-dehydratase K01710; COG: COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.404
CKO_02887
Hypothetical protein.
       0.404
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.