STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02893KEGG: tbr:Tb10.70.7860 0.0026 protein kinase K08857; COG: NOG37799 non supervised orthologous group. (147 aa)    
Predicted Functional Partners:
CKO_02894
Hypothetical protein; KEGG: ypa:YPA_3072 3.1e-176 putative flagellum-specific ATP synthase K02412; COG: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
       0.798
CKO_02895
Hypothetical protein; COG: COG1317 Flagellar biosynthesis/type III secretory pathway protein; Psort location: Cytoplasmic, score:8.96.
       0.798
CKO_02896
Hypothetical protein; COG: COG1536 Flagellar motor switch protein; Psort location: Cytoplasmic, score:9.12.
       0.798
CKO_02897
Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
       0.798
CKO_02892
Hypothetical protein; KEGG: eci:UTI89_C2333 6.1e-10 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA; COG: COG3306 Glycosyltransferase involved in LPS biosynthesis.
       0.620
fliE-2
Hypothetical protein; KEGG: sye:Syncc9902_2308 0.00027 argininosuccinate synthase K01940; COG: COG1677 Flagellar hook-basal body protein.
       0.610
CKO_02890
Hypothetical protein; KEGG: pmu:PM1844 5.3e-09 rfaF; ADP-heptose--LPS heptosyltransferase II K02843; COG: COG0859 ADP-heptose:LPS heptosyltransferase.
       0.531
CKO_02891
Hypothetical protein; KEGG: sec:SC1961 4.0e-11 fliB; N-methylation of lysine residues in flagellin K00599; COG: NOG18602 non supervised orthologous group.
       0.531
CKO_02899
Hypothetical protein; KEGG: eci:UTI89_C2502 3.3e-69 atoC; acetoacetate metabolism regulatory protein AtoC K07714; COG: COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Psort location: Cytoplasmic, score:8.96.
       0.524
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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