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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_02895Hypothetical protein; COG: COG1317 Flagellar biosynthesis/type III secretory pathway protein; Psort location: Cytoplasmic, score:8.96. (252 aa)    
Predicted Functional Partners:
CKO_02894
Hypothetical protein; KEGG: ypa:YPA_3072 3.1e-176 putative flagellum-specific ATP synthase K02412; COG: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
 
 0.990
CKO_02897
Hypothetical protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.988
CKO_02896
Hypothetical protein; COG: COG1536 Flagellar motor switch protein; Psort location: Cytoplasmic, score:9.12.
 
 
 0.987
fliE-2
Hypothetical protein; KEGG: sye:Syncc9902_2308 0.00027 argininosuccinate synthase K01940; COG: COG1677 Flagellar hook-basal body protein.
 
  
 0.981
CKO_02901
Hypothetical protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 
 0.964
CKO_02882
Hypothetical protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.963
CKO_02862
Hypothetical protein; COG: COG1516 Flagellin-specific chaperone FliS.
 
  
 0.958
flgH-2
Hypothetical protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.956
CKO_02880
Hypothetical protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.956
CKO_01978
Hypothetical protein; KEGG: stm:STM1182 1.6e-149 flgJ; flagellar biosynthesis K02395; COG: COG3951 Rod binding protein.
 
  
 0.955
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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