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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03077COG: COG3152 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46. (148 aa)    
Predicted Functional Partners:
CKO_01638
Hypothetical protein; COG: NOG08686 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
     0.767
secM
Hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.727
CKO_01988
Hypothetical protein; COG: COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
  
     0.713
CKO_03078
Hypothetical protein; COG: NOG06218 non supervised orthologous group.
 
     0.686
CKO_01158
COG: COG4811 Predicted membrane protein.
  
     0.684
CKO_02715
Hypothetical protein; COG: COG4533 ABC-type uncharacterized transport system, periplasmic component; Psort location: Cytoplasmic, score:8.96.
  
     0.681
CKO_02005
Hypothetical protein; COG: NOG14214 non supervised orthologous group.
  
     0.665
CKO_02461
Hypothetical protein; COG: NOG13868 non supervised orthologous group.
  
     0.657
CKO_01952
Hypothetical protein; COG: COG5633 Predicted periplasmic lipoprotein.
  
     0.652
wzzE
Hypothetical protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.649
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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