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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03089Hypothetical protein; KEGG: eco:b3911 1.2e-238 cpxA, ecfB, eup, ssd, rssE, ecf; probable sensor protein (histidine protein kinase), acting on ArcA K07640; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00. (457 aa)    
Predicted Functional Partners:
CKO_03088
Hypothetical protein; KEGG: eci:UTI89_C4496 1.1e-118 cpxR; transcriptional regulatory protein CpxR K07662; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
 
 0.999
CKO_03790
Hypothetical protein; KEGG: psp:PSPPH_3276 1.4e-71 sensory box sensor histidine kinase/response regulator; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:10.00.
  
 
0.944
CKO_04614
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
 
 
0.935
CKO_03173
COG: COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance.
     
 0.925
CKO_00702
Hypothetical protein; KEGG: eci:UTI89_C2354 1.7e-122 baeR; transcriptional response regulatory protein BaeR K07664; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
 
 
 0.852
CKO_01922
Hypothetical protein; KEGG: eci:UTI89_C0698 2.9e-31 kdpE; transcriptional regulatory protein KdpE K07667; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
 
 0.844
CKO_04827
Hypothetical protein; KEGG: bur:Bcep18194_A5728 6.3e-59 two component transcriptional regulator, winged helix family; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
 
 
 0.827
CKO_02246
Hypothetical protein; KEGG: fal:FRAAL1628 1.3e-49 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
 0.800
CKO_03387
Hypothetical protein; KEGG: eci:UTI89_C5174 6.1e-125 arcA; ArcA transcriptional dual regulator K07773; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score:9.97.
 
 
 0.799
CKO_04139
Hypothetical protein; KEGG: spt:SPA2823 0. barA; sensor protein; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.99.
 
 
0.796
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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