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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaAHypothetical protein; KEGG: ecj:JW5561 2.2e-221 rhaA; L-rhamnose isomerase K01813; COG: COG4806 L-rhamnose isomerase; Psort location: Cytoplasmic, score:8.96. (419 aa)    
Predicted Functional Partners:
rhaB
Hypothetical protein; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.
 
 
 0.999
rhaM
Hypothetical protein; Involved in the anomeric conversion of L-rhamnose.
 
 
 0.992
rhaD
Hypothetical protein; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily.
 
  
 0.921
fucI
Hypothetical protein; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
  
   
 0.709
fucK
Hypothetical protein; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family.
  
  
 0.705
xylB
Hypothetical protein; KEGG: bxe:Bxe_A0729 4.1e-158 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases.
  
  
 0.664
CKO_04132
Hypothetical protein; KEGG: abo:ABO_1407 3.8e-52 sugar kinase, putative K00924; COG: COG1070 Sugar (pentulose and hexulose) kinases.
  
  
 0.664
xylB-2
Hypothetical protein; KEGG: spt:SPA3511 2.6e-236 xylB; xylulose kinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases.
  
  
 0.664
CKO_05037
Hypothetical protein; KEGG: stm:STM3674 5.5e-234 lyxK; L-xylulose kinase K00880; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score:8.96.
  
  
 0.664
rhaT
Hypothetical protein; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family.
 
  
 0.626
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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