| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CKO_03174 | nuoC | CKO_03174 | CKO_00510 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.864 |
| CKO_03174 | rplD | CKO_03174 | CKO_04737 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | Hypothetical protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.874 |
| CKO_03174 | rplI | CKO_03174 | CKO_03629 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | Hypothetical protein; Binds to the 23S rRNA. | 0.858 |
| CKO_03174 | rplM | CKO_03174 | CKO_04634 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.864 |
| CKO_03174 | rplT | CKO_03174 | CKO_01742 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | Hypothetical protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.862 |
| CKO_03174 | rpmA | CKO_03174 | CKO_04589 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.925 |
| CKO_03174 | rpmJ | CKO_03174 | CKO_02695 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | COG: COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.880 |
| CKO_03174 | rpsG | CKO_03174 | CKO_04747 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.894 |
| CKO_03174 | rpsN | CKO_03174 | CKO_04721 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | Hypothetical protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.860 |
| CKO_03174 | rpsP | CKO_03174 | CKO_03932 | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | COG: COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.921 |
| nuoC | CKO_03174 | CKO_00510 | CKO_03174 | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | 0.864 |
| nuoC | rplD | CKO_00510 | CKO_04737 | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | Hypothetical protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.583 |
| nuoC | rplT | CKO_00510 | CKO_01742 | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | Hypothetical protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.508 |
| nuoC | rpmA | CKO_00510 | CKO_04589 | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.414 |
| nuoC | rpmJ | CKO_00510 | CKO_02695 | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | COG: COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. | 0.556 |
| nuoC | rpsG | CKO_00510 | CKO_04747 | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.880 |
| nuoC | rpsN | CKO_00510 | CKO_04721 | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | Hypothetical protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.637 |
| nuoC | rpsP | CKO_00510 | CKO_03932 | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | COG: COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.633 |
| rplD | CKO_03174 | CKO_04737 | CKO_03174 | Hypothetical protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Hypothetical protein; KEGG: reh:H16_A3611 7.4e-33 pth2; peptidyl-tRNA hydrolase; COG: COG1186 Protein chain release factor B. | 0.874 |
| rplD | nuoC | CKO_04737 | CKO_00510 | Hypothetical protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Hypothetical protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.583 |
STRING v12.5 is now available!
