STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03254Hypothetical protein; KEGG: cdi:DIP0942 0.0019 xseA; exodeoxyribonuclease VII large subunit K03601; COG: NOG06276 non supervised orthologous group. (518 aa)    
Predicted Functional Partners:
CKO_03255
Hypothetical protein; COG: NOG09806 non supervised orthologous group.
 
   
 0.953
CKO_00018
Hypothetical protein; KEGG: bja:blr3367 3.7e-07 probable cellulase K01179; COG: NOG14136 non supervised orthologous group; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 
 0.868
CKO_02181
Hypothetical protein; KEGG: pen:PSEEN2212 1.5e-185 ftsK; cell division protein FtsK; COG: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Psort location: CytoplasmicMembrane, score:10.00.
   
 
 0.826
CKO_00232
Hypothetical protein; COG: NOG06210 non supervised orthologous group.
  
 
 
 0.750
CKO_01846
Hypothetical protein.
  
 
 0.681
CKO_01143
Hypothetical protein; KEGG: stm:STM1845 0. prc; carboxy-terminal protease for penicillin-binding protein 3 K03797; COG: COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
  
   0.660
CKO_00863
Hypothetical protein; KEGG: ecp:ECP_1976 3.3e-37 putative D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score:8.96.
  
 
 0.658
CKO_04978
Hypothetical protein; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score:8.96.
    
 
 0.644
CKO_03433
Hypothetical protein; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score:8.96.
  
   
 0.635
btuB
Hypothetical protein; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily.
    
 
 0.628
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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