STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03317Hypothetical protein; KEGG: lsl:LSL_1322 7.6e-05 alkaline phosphatase K01077; COG: COG0586 Uncharacterized membrane-associated protein; Psort location: CytoplasmicMembrane, score:10.00. (255 aa)    
Predicted Functional Partners:
CKO_04403
Hypothetical protein; KEGG: lsl:LSL_1322 1.7e-06 alkaline phosphatase K01077; COG: COG0586 Uncharacterized membrane-associated protein; Psort location: CytoplasmicMembrane, score:9.46.
 
   
 0.803
CKO_00658
Hypothetical protein; KEGG: lsl:LSL_1322 0.00055 alkaline phosphatase K01077; COG: COG0586 Uncharacterized membrane-associated protein; Psort location: CytoplasmicMembrane, score:9.46.
  
   
 0.569
CKO_03318
Hypothetical protein; KEGG: bcz:BCZK2914 7.1e-07 adaA; methylphosphotriester-DNA alkyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
     
 0.512
araA
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
     
 0.428
CKO_01425
Hypothetical protein; KEGG: ecp:ECP_1403 0. probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
     
 0.413
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.