close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03318Hypothetical protein; KEGG: bcz:BCZK2914 7.1e-07 adaA; methylphosphotriester-DNA alkyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97. (281 aa)    
Predicted Functional Partners:
rhaS
Hypothetical protein; Activates expression of the rhaBAD and rhaT operons.
 
 
 0.714
araB
Hypothetical protein; KEGG: spt:SPA0105 6.4e-288 araB; L-ribulokinase K00853; COG: COG1069 Ribulose kinase.
 
   
 0.641
CKO_02450
Hypothetical protein; KEGG: bcz:BCZK3497 1.9e-13 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.26.
  
     0.636
CKO_03828
Hypothetical protein; KEGG: bat:BAS3585 3.1e-11 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
  
   
 0.625
CKO_01552
Hypothetical protein; KEGG: bat:BAS3585 1.9e-09 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
  
   
 0.610
CKO_02591
Hypothetical protein; KEGG: bcz:BCZK3497 5.1e-09 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
  
   
 0.592
CKO_03619
Hypothetical protein; KEGG: bce:BC3740 3.1e-11 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:8.96.
  
     0.556
araA
Hypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
   
 0.517
CKO_03317
Hypothetical protein; KEGG: lsl:LSL_1322 7.6e-05 alkaline phosphatase K01077; COG: COG0586 Uncharacterized membrane-associated protein; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.512
CKO_01050
Hypothetical protein; KEGG: aha:AHA_1903 1.8e-139 L-arabinose ABC transporter, periplasmic L-arabinose-binding protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:10.00.
 
   
 0.508
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.