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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araAHypothetical protein; Catalyzes the conversion of L-arabinose to L-ribulose. (500 aa)    
Predicted Functional Partners:
araB
Hypothetical protein; KEGG: spt:SPA0105 6.4e-288 araB; L-ribulokinase K00853; COG: COG1069 Ribulose kinase.
 
 
 0.999
araD
Hypothetical protein; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction).
 
 
 0.986
ulaF
Hypothetical protein; Catalyzes the isomerization of L-ribulose 5-phosphate to D- xylulose 5-phosphate. Is involved in the anaerobic L-ascorbate utilization.
 
 
 0.973
CKO_05041
Hypothetical protein; KEGG: sty:STY4119 2.5e-119 yiaS, sgbE; putative sugar isomerase K03080; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
 
 0.973
CKO_00688
Hypothetical protein; KEGG: rle:pRL90117 2.1e-193 putative D-ribulokinase/ribitol kinase K00875; COG: COG1069 Ribulose kinase.
  
 
 0.935
CKO_03264
Hypothetical protein; KEGG: sde:Sde_0777 2.4e-98 ribosomal protein L11 methyltransferase K01209; COG: COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.800
fucA
Hypothetical protein; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
  
 0.592
CKO_03318
Hypothetical protein; KEGG: bcz:BCZK2914 7.1e-07 adaA; methylphosphotriester-DNA alkyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
 
   
 0.517
galK
Hypothetical protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
   
 0.490
xylA
Hypothetical protein; KEGG: sec:SC3596 2.0e-236 xylA; D-xylose isomerase K01805; COG: COG2115 Xylose isomerase; Psort location: Cytoplasmic, score:9.26; Belongs to the xylose isomerase family.
  
   
 0.470
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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