Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CKO_03358Hypothetical protein; KEGG: reu:Reut_B5809 7.3e-65 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826; COG: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); Psort location: Cytoplasmic, score:8.96. (295 aa)    
Predicted Functional Partners:
CKO_03359
Hypothetical protein; Uptake of citrate across the boundary membrane with the concomitant uptake of a sodium ion (symport system). Belongs to the sodium:citrate (SCF) symporter family.
 
     0.857
garL
Hypothetical protein; Catalyzes the reversible retro-aldol cleavage of both 5-keto- 4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde; Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily.
  
  
 0.629
CKO_03362
Hypothetical protein; KEGG: btl:BALH_0517 1.4e-20 response regulator; COG: COG4565 Response regulator of citrate/malate metabolism; Psort location: Cytoplasmic, score:8.96.
 
     0.588
CKO_03361
Hypothetical protein; KEGG: eca:ECA2577 1.1e-164 citA; two-component sensor kinase K07700; COG: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; Psort location: CytoplasmicMembrane, score:9.99.
 
     0.566
CKO_03360
Hypothetical protein.
       0.534
rihC
Hypothetical protein; Hydrolyzes both purine and pyrimidine ribonucleosides with a broad-substrate specificity.
       0.478
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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