close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03375Hypothetical protein; KEGG: dsy:DSY4088 0.0047 dmsC; putative anaerobic DMSO reductase chain C anchor subunit K00369; COG: COG1584 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46. (188 aa)    
Predicted Functional Partners:
CKO_02167
Hypothetical protein; KEGG: shn:Shewana3_1556 2.6e-76 methionine gamma-lyase K01761; COG: COG2116 Formate/nitrite family of transporters; Psort location: CytoplasmicMembrane, score:10.00.
  
   
 0.653
aqpZ
Hypothetical protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.650
actP
Hypothetical protein; Transports acetate; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.629
ppa
Hypothetical protein; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
      
 0.577
CKO_03374
Hypothetical protein.
       0.515
CKO_03176
Hypothetical protein; COG: NOG13866 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0253 family.
  
     0.404
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.