Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CKO_03414Hypothetical protein; KEGG: vfi:VFA0008 3.2e-39 phospholipase; COG: COG4667 Predicted esterase of the alpha-beta hydrolase superfamily. (333 aa)    
Predicted Functional Partners:
CKO_03413
Hypothetical protein; KEGG: stm:STM4564 3.6e-111 yjjV; putative hydrolase K03424; COG: COG0084 Mg-dependent DNase; Psort location: Cytoplasmic, score:8.96.
  
    0.928
CKO_03415
Hypothetical protein; COG: NOG16919 non supervised orthologous group.
     
 0.699
CKO_01638
Hypothetical protein; COG: NOG08686 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
     0.682
CKO_02461
Hypothetical protein; COG: NOG13868 non supervised orthologous group.
  
     0.596
CKO_01988
Hypothetical protein; COG: COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
  
     0.573
CKO_00709
Hypothetical protein; KEGG: eci:UTI89_C0016 9.6e-11 dnaK; chaperone HSP70; DNA biosynthesis; autoregulated heat shock proteins K04043; COG: COG0443 Molecular chaperone.
  
    0.559
uspB
Hypothetical protein; COG: NOG09779 non supervised orthologous group.
  
   
 0.544
CKO_03077
COG: COG3152 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.543
CKO_01577
Hypothetical protein; COG: NOG11441 non supervised orthologous group; Belongs to the UPF0482 family.
  
   
 0.532
CKO_01312
Hypothetical protein; KEGG: eci:UTI89_C1430 3.3e-140 ychK; hypothetical protein; COG: COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
  
 0.490
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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