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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03415Hypothetical protein; COG: NOG16919 non supervised orthologous group. (73 aa)    
Predicted Functional Partners:
CKO_03416
Hypothetical protein; KEGG: hin:HI0574 0.0062 fkpA; probable fkbp-type peptidyl-prolyl cis-trans isomerase (PPIase) (ROTAMase) K03772; COG: COG2823 Predicted periplasmic or secreted lipoprotein; Psort location: Periplasmic, score:10.00.
 
  
 0.947
CKO_03869
COG: COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
 
  
 0.918
CKO_04205
Hypothetical protein; COG: NOG13901 non supervised orthologous group.
   
    0.836
CKO_03998
Hypothetical protein; KEGG: tko:TK1596 0.0027 archaeal/vacuolar-type H+-ATPase, subunit H K02121; COG: KOG1075 FOG: Reverse transcriptase.
  
    0.827
CKO_04544
Hypothetical protein; COG: COG2823 Predicted periplasmic or secreted lipoprotein; Psort location: Periplasmic, score:9.76.
  
    0.827
CKO_03336
Hypothetical protein; COG: NOG17119 non supervised orthologous group.
   
    0.815
CKO_04173
Hypothetical protein; COG: NOG14132 non supervised orthologous group.
   
    0.815
wecH
Hypothetical protein; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.
   
    0.614
CKO_03414
Hypothetical protein; KEGG: vfi:VFA0008 3.2e-39 phospholipase; COG: COG4667 Predicted esterase of the alpha-beta hydrolase superfamily.
     
 0.612
CKO_03413
Hypothetical protein; KEGG: stm:STM4564 3.6e-111 yjjV; putative hydrolase K03424; COG: COG0084 Mg-dependent DNase; Psort location: Cytoplasmic, score:8.96.
       0.512
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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