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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03416Hypothetical protein; KEGG: hin:HI0574 0.0062 fkpA; probable fkbp-type peptidyl-prolyl cis-trans isomerase (PPIase) (ROTAMase) K03772; COG: COG2823 Predicted periplasmic or secreted lipoprotein; Psort location: Periplasmic, score:10.00. (205 aa)    
Predicted Functional Partners:
CKO_03415
Hypothetical protein; COG: NOG16919 non supervised orthologous group.
 
  
 0.947
CKO_03869
COG: COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
 
  
 0.929
CKO_04012
COG: COG1652 Uncharacterized protein containing LysM domain.
  
  
 0.858
CKO_02705
COG: COG3126 Uncharacterized protein conserved in bacteria.
  
  
 0.850
CKO_04500
Hypothetical protein; KEGG: tma:TM1614 0.0016 ATP synthase F0, subunit b K02109; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
 
    0.844
CKO_00687
Hypothetical protein; KEGG: eco:b2097 1.6e-181 fbaB, dhnA; fructose-bisphosphate aldolase class I K01623; COG: COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes.
   
    0.828
CKO_01519
Hypothetical protein; KEGG: pfl:PFL_0043 2.4e-43 osmC; hydroperoxide resistance protein OsmC K04063; COG: COG1764 Predicted redox protein, regulator of disulfide bond formation.
   
  
 0.793
CKO_00524
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
 
    0.753
CKO_04499
Hypothetical protein; KEGG: mja:MJ1454 0.00013 aroD; 3-dehydroquinate dehydratase K03785; COG: NOG17164 non supervised orthologous group.
  
    0.752
CKO_04173
Hypothetical protein; COG: NOG14132 non supervised orthologous group.
  
    0.682
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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