Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CKO_03434Hypothetical protein; COG: NOG09075 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (240 aa)    
Predicted Functional Partners:
CKO_03433
Hypothetical protein; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score:8.96.
 
   
 0.970
CKO_04139
Hypothetical protein; KEGG: spt:SPA2823 0. barA; sensor protein; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.99.
  
 
 0.928
CKO_04368
Hypothetical protein; KEGG: sbo:SBO_2396 2.5e-190 evgS, evgA; putative sensor for regulator EvgA K07679; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score:9.82.
   
 
 0.868
CKO_01465
Hypothetical protein; KEGG: bfl:Bfl281 6.5e-05 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536; COG: NOG06285 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
   
 0.775
CKO_02362
Hypothetical protein; KEGG: stm:STM0786 7.0e-211 ybhC; putative pectinesterase K01051; COG: COG4677 Pectin methylesterase.
  
    0.774
CKO_02548
Hypothetical protein; KEGG: ecc:c0699 7.9e-116 rna; ribonuclease I precursor K01169; COG: COG3719 Ribonuclease I; Belongs to the RNase T2 family.
  
     0.764
CKO_04981
Hypothetical protein; KEGG: vfi:VFA0886 8.9e-26 zinc metalloprotease; COG: NOG14695 non supervised orthologous group.
  
     0.763
sbmC
Hypothetical protein; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell.
  
     0.757
CKO_00728
Hypothetical protein; KEGG: eci:UTI89_C2331 1.5e-190 wcaC; putative glycosyltransferase K00754; COG: COG0438 Glycosyltransferase.
  
     0.755
CKO_00411
Hypothetical protein; KEGG: cpr:CPR_1400 4.3e-09 chloride channel protein K01529; COG: COG0038 Chloride channel protein EriC; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.742
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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