Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CKO_03444Hypothetical protein; COG: COG2879 Uncharacterized small protein. (107 aa)    
Predicted Functional Partners:
CKO_03445
Hypothetical protein; KEGG: reh:H16_A0195 3.9e-59 putative GTPase (G3E family); COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score:8.96.
  
  
 0.987
CKO_03443
COG: COG1966 Carbon starvation protein, predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.985
CKO_02563
Hypothetical protein; KEGG: xtr:3283503 0.0075 ND6; NADH dehydrogenase subunit 6 K03884; COG: COG1966 Carbon starvation protein, predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.939
CKO_00925
Hypothetical protein; KEGG: ret:RHE_CH02713 1.1e-123 probable cobalamin synthesis protein; COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score:8.96.
  
  
 0.801
CKO_00931
Hypothetical protein; KEGG: ftf:FTF1000c 2.1e-28 cobS; cobalamin (vitamin B12) synthesis protein/P47K family protein; COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score:8.96.
  
  
 0.801
CKO_00607
Hypothetical protein; KEGG: reh:H16_A3373 5.1e-17 putative GTPase (G3E family); COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score:8.96.
  
  
 0.548
CKO_02919
Hypothetical protein; KEGG: chu:CHU_0938 0.0054 CHU large protein; uncharacterized K01238; COG: COG3188 P pilus assembly protein, porin PapC; Psort location: OuterMembrane, score:10.00.
  
     0.507
CKO_00963
COG: COG3188 P pilus assembly protein, porin PapC; Psort location: OuterMembrane, score:10.00.
  
     0.499
CKO_03233
COG: COG3188 P pilus assembly protein, porin PapC; Psort location: OuterMembrane, score:10.00.
  
     0.490
CKO_00964
Hypothetical protein; KEGG: ech:ECH_0340 0.0064 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057; COG: COG3539 P pilus assembly protein, pilin FimA; Psort location: Extracellular, score:9.71.
  
     0.487
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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