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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03448Hypothetical protein; KEGG: bja:bll2512 0.0077 putative acetyltransferase K03828; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score:8.96. (152 aa)    
Predicted Functional Partners:
CKO_03446
Hypothetical protein; COG: NOG06307 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.931
CKO_03447
Hypothetical protein; COG: COG1566 Multidrug resistance efflux pump.
 
  
 0.931
CKO_03449
Hypothetical protein; COG: COG5457 Uncharacterized conserved small protein; Psort location: Cytoplasmic, score:8.96.
       0.477
CKO_00690
Hypothetical protein; COG: COG1609 Transcriptional regulators; Psort location: Cytoplasmic, score:9.97.
  
    0.476
CKO_03080
Hypothetical protein; COG: COG0471 Di- and tricarboxylate transporters; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.454
CKO_00314
Hypothetical protein; KEGG: eci:UTI89_C2800 1.3e-108 ypfH; hypothetical protein YpfH; COG: COG0400 Predicted esterase.
 
     0.435
CKO_04614
Hypothetical protein; KEGG: sec:SC3266 0. arcB; aerobic respiration control sensor protein K07648; COG: COG0784 FOG: CheY-like receiver; Psort location: CytoplasmicMembrane, score:9.97.
  
  
 0.429
CKO_02927
Hypothetical protein; KEGG: lwe:lwe1439 1.2e-32 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; COG: COG1174 ABC-type proline/glycine betaine transport systems, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.426
CKO_03396
Hypothetical protein; KEGG: stm:STM4580.S 1.5e-217 nadR; nicotinamide-nucleotide adenylyltransferase K00952:K06210:K06211; COG: COG3172 Predicted ATPase/kinase involved in NAD metabolism; Psort location: Cytoplasmic, score:8.96.
  
 
 0.411
birA
Hypothetical protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.403
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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