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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03461Hypothetical protein; KEGG: eci:UTI89_C5041 9.0e-147 yjiJ; hypothetical protein YjiJ K00403; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (396 aa)    
Predicted Functional Partners:
CKO_03804
Hypothetical protein; KEGG: eci:UTI89_C1133 1.3e-15 hypothetical protein; COG: COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.559
CKO_03404
COG: COG3121 P pilus assembly protein, chaperone PapD.
  
     0.541
CKO_03812
Hypothetical protein; KEGG: pmu:PM0023 0.0014 nrfA; nitrite reductase periplasmic cytochrome c552 K03385; COG: NOG06794 non supervised orthologous group.
  
     0.528
CKO_03114
COG: COG3121 P pilus assembly protein, chaperone PapD.
  
     0.508
CKO_03459
Hypothetical protein; KEGG: eci:UTI89_C5044 2.4e-114 yjiL; hypothetical protein YjiL K04111; COG: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain).
       0.506
CKO_03460
Hypothetical protein; Psort location: Cytoplasmic, score:8.96.
       0.506
CKO_01377
COG: COG3204 Uncharacterized protein conserved in bacteria.
  
     0.504
CKO_03405
COG: COG3188 P pilus assembly protein, porin PapC; Psort location: OuterMembrane, score:10.00.
  
     0.501
CKO_01123
Hypothetical protein; KEGG: psp:PSPPH_2956 8.3e-08 hydrolase, carbon-nitrogen family K01950; COG: COG0388 Predicted amidohydrolase.
  
    0.499
CKO_03458
Hypothetical protein; KEGG: eci:UTI89_C5045 1.4e-187 yjiM; hypothetical protein YjiM K04111; COG: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB.
       0.499
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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