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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03468Hypothetical protein; COG: COG3177 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96. (366 aa)    
Predicted Functional Partners:
hscA
Hypothetical protein; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU.
    
 
 0.604
CKO_00709
Hypothetical protein; KEGG: eci:UTI89_C0016 9.6e-11 dnaK; chaperone HSP70; DNA biosynthesis; autoregulated heat shock proteins K04043; COG: COG0443 Molecular chaperone.
    
 
 0.604
CKO_02852
Hypothetical protein; COG: NOG08675 non supervised orthologous group.
    
 
 0.604
dnaK
Hypothetical protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.604
CKO_03469
Hypothetical protein; KEGG: nme:NMB1289 1.9e-50 type II restriction enzyme, putative K01155; COG: NOG14036 non supervised orthologous group.
       0.501
CKO_04783
COG: COG2184 Protein involved in cell division; Psort location: Cytoplasmic, score:8.96.
 
  
 0.501
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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