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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03469Hypothetical protein; KEGG: nme:NMB1289 1.9e-50 type II restriction enzyme, putative K01155; COG: NOG14036 non supervised orthologous group. (400 aa)    
Predicted Functional Partners:
CKO_03470
Hypothetical protein; KEGG: plu:plu0338 2.7e-193 dcm; DNA-cytosine methyltransferase K00558; COG: COG0270 Site-specific DNA methylase; Psort location: Cytoplasmic, score:8.96.
 
   
 0.795
CKO_00981
Hypothetical protein; KEGG: stm:STM1992 1.4e-228 dcm; DNA cytosine methylase K00558; COG: COG0270 Site-specific DNA methylase; Psort location: Cytoplasmic, score:8.96.
 
   
 0.756
mutL
Hypothetical protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
   
 
 0.674
CKO_04356
Hypothetical protein; COG: COG3456 Uncharacterized conserved protein, contains FHA domain; Psort location: Cytoplasmic, score:8.96.
  
     0.558
CKO_01867
Hypothetical protein; COG: NOG09073 non supervised orthologous group.
  
     0.554
CKO_02869
Hypothetical protein; KEGG: eci:UTI89_C2354 0.0014 baeR; transcriptional response regulatory protein BaeR K07664; COG: COG3710 DNA-binding winged-HTH domains.
  
     0.534
CKO_03452
Hypothetical protein; COG: COG5464 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
  
     0.523
CKO_03468
Hypothetical protein; COG: COG3177 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
       0.501
CKO_02684
Hypothetical protein; COG: COG5464 Uncharacterized conserved protein.
  
     0.489
CKO_01848
Hypothetical protein; COG: NOG11915 non supervised orthologous group; Psort location: OuterMembrane, score:9.49.
  
     0.437
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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