Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03476Hypothetical protein; COG: COG3311 Predicted transcriptional regulator; Psort location: Cytoplasmic, score:8.96. (66 aa)    
Predicted Functional Partners:
CKO_03477
Hypothetical protein.
       0.773
CKO_03479
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.726
CKO_03480
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.612
CKO_03532
Hypothetical protein; COG: COG0582 Integrase; Psort location: Cytoplasmic, score:8.96; Belongs to the 'phage' integrase family.
  
     0.599
CKO_02950
Hypothetical protein; COG: COG0582 Integrase.
  
     0.584
CKO_03478
Hypothetical protein; COG: NOG06299 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.554
CKO_00953
Hypothetical protein; COG: COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.534
CKO_00917
Hypothetical protein; COG: COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.533
CKO_03475
Hypothetical protein; COG: NOG32955 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.490
CKO_03944
Hypothetical protein; COG: COG0582 Integrase; Belongs to the 'phage' integrase family.
  
     0.451
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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