Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03480Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (228 aa)    
Predicted Functional Partners:
CKO_03479
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
     0.986
CKO_00889
Hypothetical protein; COG: COG2948 Type IV secretory pathway, VirB10 components.
  
 
 0.935
CKO_00891
Hypothetical protein; COG: COG3736 Type IV secretory pathway, component VirB8.
  
 
 0.934
CKO_00893
Hypothetical protein; COG: COG3704 Type IV secretory pathway, VirB6 components; Psort location: CytoplasmicMembrane, score:10.00.
  
 
 0.934
CKO_03478
Hypothetical protein; COG: NOG06299 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
   
 0.872
CKO_00897
Hypothetical protein; COG: NOG22876 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
  
 0.820
CKO_00890
Hypothetical protein; COG: COG3504 Type IV secretory pathway, VirB9 components.
  
  
 0.811
CKO_03489
Hypothetical protein; COG: NOG06092 non supervised orthologous group.
 
 
   0.808
CKO_03487
Hypothetical protein; COG: NOG06091 non supervised orthologous group.
 
     0.802
CKO_03491
Hypothetical protein; COG: NOG06088 non supervised orthologous group.
 
     0.798
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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