STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03489Hypothetical protein; COG: NOG06092 non supervised orthologous group. (455 aa)    
Predicted Functional Partners:
CKO_03487
Hypothetical protein; COG: NOG06091 non supervised orthologous group.
 
     0.952
CKO_03491
Hypothetical protein; COG: NOG06088 non supervised orthologous group.
 
     0.952
CKO_03492
Hypothetical protein; COG: NOG06088 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
 
     0.876
CKO_03479
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
 
   0.810
CKO_03480
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
 
   0.809
CKO_03490
Hypothetical protein.
       0.799
CKO_03501
Hypothetical protein; COG: NOG08745 non supervised orthologous group.
 
    0.783
CKO_03502
Hypothetical protein; COG: NOG08745 non supervised orthologous group.
 
    0.783
CKO_03478
Hypothetical protein; COG: NOG06299 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
   
 0.776
CKO_04346
Hypothetical protein; COG: NOG06299 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
   
 0.776
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.