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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03501Hypothetical protein; COG: NOG08745 non supervised orthologous group. (420 aa)    
Predicted Functional Partners:
CKO_03502
Hypothetical protein; COG: NOG08745 non supervised orthologous group.
     0.986
CKO_03499
Hypothetical protein; KEGG: vfi:VFB02 1.7e-24 traC; DNA primase TraC; COG: COG4227 Antirestriction protein.
 
    0.858
CKO_03500
Hypothetical protein; KEGG: vfi:VFB02 2.8e-24 traC; DNA primase TraC; COG: COG4227 Antirestriction protein.
 
    0.838
CKO_03489
Hypothetical protein; COG: NOG06092 non supervised orthologous group.
 
    0.783
CKO_03478
Hypothetical protein; COG: NOG06299 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
  
 0.779
CKO_04346
Hypothetical protein; COG: NOG06299 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
  
 0.779
CKO_00902
Hypothetical protein; COG: NOG11459 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.776
CKO_03491
Hypothetical protein; COG: NOG06088 non supervised orthologous group.
  
     0.773
CKO_03492
Hypothetical protein; COG: NOG06088 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.772
CKO_03479
Hypothetical protein; COG: NOG06090 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
   
 0.761
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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