STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03511Hypothetical protein; COG: COG0535 Predicted Fe-S oxidoreductases. (370 aa)    
Predicted Functional Partners:
CKO_03512
Hypothetical protein; KEGG: syg:sync_2368 0.0053 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); Psort location: Cytoplasmic, score:8.96.
 
   
 0.958
CKO_03513
Hypothetical protein.
       0.773
CKO_00362
COG: COG3203 Outer membrane protein (porin); Psort location: OuterMembrane, score:10.00.
  
    0.736
CKO_01425
Hypothetical protein; KEGG: ecp:ECP_1403 0. probable pyruvate-flavodoxin oxidoreductase K03737; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
  
 0.525
cysG
Hypothetical protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.514
CKO_02440
Hypothetical protein; KEGG: eci:UTI89_C0121 7.2e-209 usp; uropathogenic specific protein K01150; COG: COG5529 Pyocin large subunit.
  
     0.493
CKO_03779
Hypothetical protein; KEGG: gbe:GbCGDNIH1_1079 7.9e-05 metal-dependent hydrolase; COG: COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
  
  
 0.485
CKO_00042
Hypothetical protein; COG: COG3391 Uncharacterized conserved protein.
  
  
 0.482
CKO_01494
Hypothetical protein; COG: COG3391 Uncharacterized conserved protein.
  
  
 0.482
CKO_02606
Hypothetical protein; KEGG: dra:DRA0202 0.00030 superoxide dismutase (sodC), Cu-Zn family K04565; COG: COG3391 Uncharacterized conserved protein.
  
  
 0.482
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.