CKO_03523 protein (Citrobacter koseri) - STRING interaction network

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CKO_03523

Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02. (456 aa)

Predicted Functional Partners:

rpsB

0.969

rplB

0.966

rplO

0.965

rplP

0.965

rpsC

0.965

rpsD

0.964

rplD

0.964

rplC

0.964

rplF

0.963

rpsS

0.962

Your Current Organism:

Citrobacter koseri

NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CKO_03523	rplB	CKO_03523	CKO_04733	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.966
CKO_03523	rplC	CKO_03523	CKO_04738	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.964
CKO_03523	rplD	CKO_03523	CKO_04737	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.964
CKO_03523	rplF	CKO_03523	CKO_04719	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.963
CKO_03523	rplO	CKO_03523	CKO_04713	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.965
CKO_03523	rplP	CKO_03523	CKO_04727	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.965
CKO_03523	rpsB	CKO_03523	CKO_03199	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	COG: COG0052 Ribosomal protein S2; Psort location: Cytoplasmic, score:8.96; Belongs to the universal ribosomal protein uS2 family.	0.969
CKO_03523	rpsC	CKO_03523	CKO_04729	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.965
CKO_03523	rpsD	CKO_03523	CKO_04709	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.964
CKO_03523	rpsS	CKO_03523	CKO_04732	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	Hypothetical protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.962
rplB	CKO_03523	CKO_04733	CKO_03523	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; KEGG: pcr:Pcryo_1407 1.9e-09 DNA polymerase III, subunits gamma and tau K00961; COG: NOG10802 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:8.02.	0.966
rplB	rplC	CKO_04733	CKO_04738	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.998
rplB	rplD	CKO_04733	CKO_04737	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.996
rplB	rplF	CKO_04733	CKO_04719	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.997
rplB	rplO	CKO_04733	CKO_04713	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.996
rplB	rplP	CKO_04733	CKO_04727	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.997
rplB	rpsB	CKO_04733	CKO_03199	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	COG: COG0052 Ribosomal protein S2; Psort location: Cytoplasmic, score:8.96; Belongs to the universal ribosomal protein uS2 family.	0.993
rplB	rpsC	CKO_04733	CKO_04729	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.997
rplB	rpsD	CKO_04733	CKO_04709	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.995
rplB	rpsS	CKO_04733	CKO_04732	Hypothetical protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Hypothetical protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.998

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