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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03545Hypothetical protein; COG: NOG23016 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (283 aa)    
Predicted Functional Partners:
CKO_03544
Hypothetical protein; COG: NOG27069 non supervised orthologous group.
       0.785
CKO_03546
Hypothetical protein.
       0.655
CKO_02441
Hypothetical protein; COG: NOG17103 non supervised orthologous group.
   
 
 0.562
CKO_02443
Hypothetical protein; COG: NOG17103 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
   
 
 0.562
tuf
Hypothetical protein; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.555
tuf-2
Hypothetical protein; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.555
CKO_03547
Hypothetical protein.
       0.499
CKO_03548
Hypothetical protein; COG: NOG23016 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
      
0.471
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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