close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03586Hypothetical protein; KEGG: btl:BALH_4413 1.3e-74 possible dihydroorotase K01486; COG: COG3964 Predicted amidohydrolase. (377 aa)    
Predicted Functional Partners:
CKO_03585
Hypothetical protein; KEGG: efa:EF0838 4.3e-92 pyridoxal phosphate-dependent enzyme, putative K01042; COG: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase].
 
  
 0.954
CKO_03584
Hypothetical protein; COG: NOG08125 non supervised orthologous group.
 
    0.929
CKO_03587
Hypothetical protein; KEGG: rpa:RPA1257 0.0064 cobS; possible cobalamin (5'-phosphate) synthase K02233; COG: NOG08746 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.916
CKO_03588
Hypothetical protein; KEGG: reh:H16_A3130 0.0057 pntAb3; NAD(P) transhydrogenase subunit alpha 2 K00323; COG: NOG07923 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.912
CKO_03590
Hypothetical protein; COG: NOG11467 non supervised orthologous group.
 
     0.903
CKO_03589
Hypothetical protein; COG: NOG18555 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.902
CKO_03591
Hypothetical protein; COG: NOG18554 non supervised orthologous group.
 
     0.902
CKO_00943
Hypothetical protein; KEGG: aha:AHA_2602 3.5e-136 dihydroorotase K01465; COG: COG0044 Dihydroorotase and related cyclic amidohydrolases; Psort location: Cytoplasmic, score:8.96.
     
  0.900
pyrC
Hypothetical protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
     
  0.900
pyrD
Hypothetical protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
     
  0.900
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.