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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03676Hypothetical protein; KEGG: eci:UTI89_C0120 0.0063 aroP; aromatic amino acid transport protein AroP K03293; COG: COG0531 Amino acid transporters; Psort location: CytoplasmicMembrane, score:10.00. (530 aa)    
Predicted Functional Partners:
epmA
Hypothetical protein; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily.
  
  
 0.913
CKO_01011
Hypothetical protein; KEGG: ecj:JW1912 4.7e-260 amyA; cytoplasmic alpha-amylase K01176; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score:9.97.
   
 0.585
CKO_02764
Hypothetical protein; KEGG: ecj:JW0393 0. malZ; maltodextrin glucosidase K01187; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score:9.97; Belongs to the glycosyl hydrolase 13 family.
   
 0.585
CKO_03572
Hypothetical protein; KEGG: stm:STM4453 2.1e-282 treC; trehalose-6-phosphate hydrolase K01226; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score:9.97.
   
 0.585
CKO_03578
Hypothetical protein; KEGG: vvy:VVA1393 6.5e-160 sucrose phosphorylase related protein K00690; COG: COG0366 Glycosidases.
   
 0.585
CKO_05029
Hypothetical protein; KEGG: eci:UTI89_C4113 0. malS; alpha-amylase precursor K01176; COG: COG0366 Glycosidases; Psort location: Periplasmic, score:10.00.
   
 0.585
dtpD
Hypothetical protein; Probable proton-dependent permease that transports dipeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpD subfamily.
  
 
 0.556
trpC
Hypothetical protein; KEGG: sfx:S1351 2.8e-214 trpC; N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase K01609:K01817; COG: COG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
    
 
 0.462
CKO_03969
Hypothetical protein; COG: COG3477 Predicted periplasmic/secreted protein.
  
     0.448
CKO_03919
Hypothetical protein; KEGG: ecj:JW2580 5.1e-192 pheA; fused chorismate mutase P and prephenate dehydratase K04093:K04518; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score:9.97.
   
 
 0.435
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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