STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_03997Hypothetical protein; KEGG: hpj:jhp1098 0.00052 polar amino acid transport system ATP-binding protein K02028; COG: COG1106 Predicted ATPases. (433 aa)    
Predicted Functional Partners:
CKO_03996
Hypothetical protein; COG: NOG14948 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.947
CKO_03472
Hypothetical protein; KEGG: chu:CHU_1556 4.2e-11 DNA helicase K01529; COG: COG1112 Superfamily I DNA and RNA helicases and helicase subunits.
  
    0.826
CKO_03984
Hypothetical protein; COG: COG3718 Uncharacterized enzyme involved in inositol metabolism; Psort location: Cytoplasmic, score:8.96.
   
    0.572
CKO_03998
Hypothetical protein; KEGG: tko:TK1596 0.0027 archaeal/vacuolar-type H+-ATPase, subunit H K02121; COG: KOG1075 FOG: Reverse transcriptase.
       0.431
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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