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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04014COG: COG2916 DNA-binding protein H-NS; Psort location: Cytoplasmic, score:9.26; Belongs to the histone-like protein H-NS family. (133 aa)    
Predicted Functional Partners:
CKO_02691
Hypothetical protein; COG: NOG13543 non supervised orthologous group.
  
 
 0.822
CKO_01637
Hypothetical protein; COG: NOG13887 non supervised orthologous group.
    
 
 0.712
CKO_01316
COG: COG2916 DNA-binding protein H-NS; Psort location: Cytoplasmic, score:9.97; Belongs to the histone-like protein H-NS family.
  
 
  
0.665
CKO_04015
Hypothetical protein.
       0.658
CKO_01710
COG: COG4238 Murein lipoprotein.
  
    0.606
CKO_04637
Hypothetical protein; KEGG: eco:b3233 1.1e-63 yhcB; hypothetical protein K00424; COG: COG3105 Uncharacterized protein conserved in bacteria.
  
     0.601
zapB
Hypothetical protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
    0.586
lptC
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
  
     0.586
CKO_03154
Hypothetical protein; KEGG: bci:BCI_0257 1.3e-51 dsbA; thiol:disulfide interchange protein DsbA K01829; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Periplasmic, score:10.00.
  
   
 0.543
lapA
Hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Belongs to the LapA family.
  
     0.521
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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