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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04021Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (144 aa)    
Predicted Functional Partners:
CKO_04020
Hypothetical protein; KEGG: eci:UTI89_C3030 1.7e-184 hypothetical protein K00375; COG: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; Psort location: Cytoplasmic, score:9.26.
 
     0.785
CKO_03720
Hypothetical protein; KEGG: vvy:VV2243 2.9e-148 adenylosuccinate lyase K01857; COG: COG0015 Adenylosuccinate lyase; Psort location: Cytoplasmic, score:8.96.
     
  0.499
CKO_04022
Hypothetical protein; KEGG: vfi:VFA1040 0.00063 glutaredoxin K00435; COG: COG0695 Glutaredoxin and related proteins; Psort location: Cytoplasmic, score:8.96.
     
 0.481
CKO_02554
Hypothetical protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.452
nrdI
Hypothetical protein; Probably involved in ribonucleotide reductase function.
       0.447
CKO_01943
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
 
     0.427
CKO_04025
Hypothetical protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
       0.424
CKO_04024
Hypothetical protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.423
CKO_03053
Hypothetical protein; KEGG: azo:azo3958 9.0e-44 pcaC; 4-carboxymuconolactone decarboxylase K01607; COG: COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit; Psort location: Cytoplasmic, score:8.96.
 
   
 0.407
CKO_00365
Hypothetical protein; COG: COG4150 ABC-type sulfate transport system, periplasmic component; Psort location: Periplasmic, score:10.00.
   
    0.400
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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