Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CKO_04028Hypothetical protein; KEGG: bpm:BURPS1710b_A0449 1.8e-63 glycine betaine/L-proline ABC transporter, permease protein K02001; COG: COG4176 ABC-type proline/glycine betaine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (354 aa)    
Predicted Functional Partners:
CKO_04027
Hypothetical protein; KEGG: stm:STM2809 8.1e-201 proV; ABC superfamily (atp_bind), glycine/betaine/proline transport protein K02000; COG: COG4175 ABC-type proline/glycine betaine transport system, ATPase component; Psort location: Cytoplasmic, score:9.12.
 
 0.999
CKO_04029
Hypothetical protein; COG: COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; Psort location: Periplasmic, score:10.00.
 
 0.998
CKO_02925
Hypothetical protein; KEGG: lwe:lwe1439 7.0e-44 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; COG: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 
 
 0.888
CKO_01587
Hypothetical protein; KEGG: lwe:lwe1443 2.0e-32 opuCC; glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding protein; COG: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 
 
 0.626
purN
Hypothetical protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.571
CKO_00663
Hypothetical protein; KEGG: lwe:lwe1439 2.2e-27 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; COG: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 
 
 0.564
CKO_03883
Hypothetical protein; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score:9.86.
     
 0.564
malK
Hypothetical protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.
     
 0.555
CKO_00563
Hypothetical protein; KEGG: reh:H16_B1682 8.0e-91 ABC-type transporter, ATPase and permease components: Pep3E family; COG: COG4615 ABC-type siderophore export system, fused ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00.
     
  0.540
CKO_00817
Hypothetical protein; COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score:10.00.
     
  0.540
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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