Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CKO_04030Hypothetical protein; KEGG: shn:Shewana3_1692 3.6e-15 Xaa-His dipeptidase K01270; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (394 aa)    
Predicted Functional Partners:
CKO_04031
Hypothetical protein; COG: COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); Psort location: CytoplasmicMembrane, score:10.00.
       0.497
CKO_04032
Hypothetical protein; KEGG: tws:TW336 0.0022 putative glycosyl transferase K02851; COG: NOG14220 non supervised orthologous group.
       0.497
CKO_04029
Hypothetical protein; COG: COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; Psort location: Periplasmic, score:10.00.
       0.448
CKO_04033
Hypothetical protein; COG: COG1846 Transcriptional regulators; Psort location: Cytoplasmic, score:9.97.
 
     0.442
CKO_01669
Hypothetical protein; KEGG: eci:UTI89_C5041 0.0032 yjiJ; hypothetical protein YjiJ K00403; COG: COG2814 Arabinose efflux permease; Psort location: CytoplasmicMembrane, score:10.00.
  
   
 0.440
CKO_04034
Hypothetical protein; COG: COG1566 Multidrug resistance efflux pump.
  
 
 0.427
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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