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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04060Hypothetical protein; COG: COG4578 Glucitol operon activator. (119 aa)    
Predicted Functional Partners:
CKO_04058
Hypothetical protein; KEGG: sfl:SF2727 8.8e-53 srlB; PTS system, glucitol-sorbitol-specific enzyme IIA component K02781; COG: COG3731 Phosphotransferase system sorbitol-specific component IIA; Psort location: Cytoplasmic, score:8.96.
 
  
 0.986
CKO_04056
Hypothetical protein; KEGG: sec:SC2765 1.5e-96 srlA; PTS family, glucitol/sorbitol-specific enzyme IIC component,one of two IIC components K02782:K02783; COG: COG3730 Phosphotransferase system sorbitol-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.984
CKO_04059
Hypothetical protein; KEGG: spt:SPA2693 2.4e-130 srlD; sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase) K00068; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.979
CKO_04057
Hypothetical protein; KEGG: sec:SC2766 2.7e-161 srlE; PTS family, glucitol/sorbitol-specific IIB component, one of two IIC components K02782:K02783; COG: COG3732 Phosphotransferase system sorbitol-specific component IIBC; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.963
CKO_04062
Hypothetical protein; KEGG: eci:UTI89_C3070 4.2e-156 gutQ; GutQ protein K02467; COG: COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Psort location: Cytoplasmic, score:8.96.
  
  
 0.776
CKO_04061
Hypothetical protein; COG: COG1349 Transcriptional regulators of sugar metabolism; Psort location: Cytoplasmic, score:8.96.
 
  
 0.745
CKO_02565
Hypothetical protein; KEGG: stm:STM0598 1.8e-118 entA; 2,3-dihydroxybenzoate-2,3-dehydrogenase K00216; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26.
 
    0.619
CKO_00364
Hypothetical protein; KEGG: stm:STM2445 4.5e-129 ucpA; putative oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.97.
  
    0.539
CKO_00844
Hypothetical protein; KEGG: rsp:RSP_2029 1.6e-92 ucpA; short chain dehydrogenase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26.
  
    0.539
CKO_01345
Hypothetical protein; KEGG: eco:b1271 4.1e-119 yciK; short chain dehydrogenase K00100; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26.
  
    0.539
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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