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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKO_04067Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. (780 aa)    
Predicted Functional Partners:
CKO_04086
Hypothetical protein; KEGG: cch:Cag_0556 2.2e-79 hypE; hydrogenase expression/formation protein HypE K04655; COG: COG0309 Hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
 
 
 0.986
CKO_04085
Hypothetical protein; COG: COG0409 Hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96; Belongs to the HypD family.
 
  
 0.895
CKO_04384
Hypothetical protein; COG: COG0298 Hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
 
 
 0.886
CKO_04084
Hypothetical protein; COG: COG0298 Hydrogenase maturation factor.
 
 
 0.872
CKO_04388
Hypothetical protein; KEGG: ecc:c3731 1.3e-298 hybC; hydrogenase-2 large chain precursor K06281; COG: COG0374 Ni,Fe-hydrogenase I large subunit; Psort location: Periplasmic, score:9.44; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 
 0.851
CKO_04083
Hypothetical protein; KEGG: reh:H16_A1087 9.9e-14 ureG; UreA amidohydrolase (urease) regulatory and maturation protein UreG; COG: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; Psort location: Cytoplasmic, score:9.97.
 
   
 0.843
hybF
Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.840
CKO_04391
Hypothetical protein; KEGG: sty:STY3321 1.0e-202 hyb0; hydrogenase small chain K06282; COG: COG1740 Ni,Fe-hydrogenase I small subunit; Psort location: Periplasmic, score:9.76.
 
 
 
 0.838
hypA
Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
   
 0.836
CKO_04387
Hypothetical protein; KEGG: sfx:S3241 4.8e-77 hybD; hydrogenase-2 component K08567; COG: COG0680 Ni,Fe-hydrogenase maturation factor; Psort location: Cytoplasmic, score:8.96.
 
   
 0.836
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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